Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Msh2P43247 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.18■□□□□ 0.5
Msh2P43247 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.18■□□□□ 0.5
Msh2P43247 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Msh2P43247 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Msh2P43247 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh2P43247 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Msh2P43247 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Msh2P43247 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.17■□□□□ 0.5
Msh2P43247 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Msh2P43247 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Msh2P43247 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.17■□□□□ 0.5
Msh2P43247 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
Msh2P43247 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh2P43247 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.16■□□□□ 0.5
Msh2P43247 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh2P43247 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Msh2P43247 Haglr-201ENSMUST00000100000 2085 ntBASIC18.16■□□□□ 0.5
Msh2P43247 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.16■□□□□ 0.5
Msh2P43247 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Msh2P43247 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.15■□□□□ 0.5
Msh2P43247 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Msh2P43247 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Msh2P43247 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.14■□□□□ 0.49
Msh2P43247 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.14■□□□□ 0.49
Msh2P43247 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.14■□□□□ 0.49
Msh2P43247 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Msh2P43247 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.14■□□□□ 0.49
Msh2P43247 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.14■□□□□ 0.49
Msh2P43247 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh2P43247 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Msh2P43247 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Msh2P43247 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Msh2P43247 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh2P43247 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh2P43247 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.13■□□□□ 0.49
Msh2P43247 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Msh2P43247 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh2P43247 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Msh2P43247 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.13■□□□□ 0.49
Msh2P43247 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms