Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gdf6P43028 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.57■□□□□ 0.56
Gdf6P43028 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.57■□□□□ 0.56
Gdf6P43028 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.57■□□□□ 0.56
Gdf6P43028 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gdf6P43028 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Gdf6P43028 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gdf6P43028 Idnk-204ENSMUST00000226010 1898 ntBASIC18.56■□□□□ 0.56
Gdf6P43028 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Gdf6P43028 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.56■□□□□ 0.56
Gdf6P43028 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.56■□□□□ 0.56
Gdf6P43028 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gdf6P43028 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.55■□□□□ 0.56
Gdf6P43028 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Gdf6P43028 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.55■□□□□ 0.56
Gdf6P43028 Gm18959-201ENSMUST00000208954 655 ntBASIC18.55■□□□□ 0.56
Gdf6P43028 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.55■□□□□ 0.56
Gdf6P43028 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gdf6P43028 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gdf6P43028 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gdf6P43028 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.55■□□□□ 0.56
Gdf6P43028 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.55■□□□□ 0.56
Gdf6P43028 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.54■□□□□ 0.56
Gdf6P43028 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gdf6P43028 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Gdf6P43028 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Gm7638-201ENSMUST00000121348 967 ntBASIC18.54■□□□□ 0.56
Gdf6P43028 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.54■□□□□ 0.56
Gdf6P43028 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.54■□□□□ 0.56
Gdf6P43028 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Gdf6P43028 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gdf6P43028 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gdf6P43028 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.53■□□□□ 0.56
Gdf6P43028 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.53■□□□□ 0.56
Gdf6P43028 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.53■□□□□ 0.56
Gdf6P43028 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gdf6P43028 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gdf6P43028 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gdf6P43028 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.52■□□□□ 0.56
Gdf6P43028 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gdf6P43028 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gdf6P43028 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms