Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.62□□□□□ -0.07
Abca1P41233 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Abca1P41233 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.62□□□□□ -0.07
Abca1P41233 Gm18959-201ENSMUST00000208954 655 ntBASIC14.62□□□□□ -0.07
Abca1P41233 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.62□□□□□ -0.07
Abca1P41233 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.61□□□□□ -0.07
Abca1P41233 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.61□□□□□ -0.07
Abca1P41233 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Mir6349-201ENSMUST00000184059 97 ntBASIC14.61□□□□□ -0.07
Abca1P41233 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Abca1P41233 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Abca1P41233 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Abca1P41233 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca1P41233 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.6□□□□□ -0.07
Abca1P41233 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca1P41233 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca1P41233 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.6□□□□□ -0.07
Abca1P41233 Gm45058-201ENSMUST00000205810 766 ntBASIC14.6□□□□□ -0.07
Abca1P41233 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca1P41233 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca1P41233 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca1P41233 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.59□□□□□ -0.07
Abca1P41233 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Abca1P41233 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.59□□□□□ -0.07
Abca1P41233 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca1P41233 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abca1P41233 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abca1P41233 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abca1P41233 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Abca1P41233 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.58□□□□□ -0.08
Abca1P41233 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.58□□□□□ -0.08
Abca1P41233 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.58□□□□□ -0.08
Abca1P41233 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.58□□□□□ -0.08
Abca1P41233 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.58□□□□□ -0.08
Abca1P41233 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Abca1P41233 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Abca1P41233 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Abca1P41233 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 AA414768-201ENSMUST00000121924 1257 ntBASIC14.58□□□□□ -0.08
Abca1P41233 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Abca1P41233 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca1P41233 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Abca1P41233 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.57□□□□□ -0.08
Abca1P41233 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Abca1P41233 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Abca1P41233 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms