Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox6P40645 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Sox6P40645 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Sox6P40645 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox6P40645 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox6P40645 Gm7290-201ENSMUST00000104990 617 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Sox6P40645 Gm12918-201ENSMUST00000120234 636 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Gm15710-201ENSMUST00000121821 636 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Gm5075-201ENSMUST00000196916 622 ntBASIC16.58■□□□□ 0.24
Sox6P40645 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.58■□□□□ 0.24
Sox6P40645 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox6P40645 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox6P40645 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox6P40645 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Sox6P40645 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sox6P40645 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Sox6P40645 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.57■□□□□ 0.24
Sox6P40645 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Sox6P40645 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sox6P40645 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Sox6P40645 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Sox6P40645 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sox6P40645 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox6P40645 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox6P40645 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Sox6P40645 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sox6P40645 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox6P40645 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.56■□□□□ 0.24
Sox6P40645 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sox6P40645 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.56■□□□□ 0.24
Sox6P40645 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox6P40645 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Gm12933-201ENSMUST00000120203 872 ntBASIC16.55■□□□□ 0.24
Sox6P40645 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.55■□□□□ 0.24
Sox6P40645 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox6P40645 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox6P40645 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Mir5133-201ENSMUST00000174955 77 ntBASIC16.54■□□□□ 0.24
Sox6P40645 Gm8969-201ENSMUST00000199694 526 ntBASIC16.54■□□□□ 0.24
Sox6P40645 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox6P40645 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sox6P40645 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Sox6P40645 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox6P40645 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sox6P40645 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox6P40645 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms