Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Cd9P40240 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.4■□□□□ 0.38
Cd9P40240 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.4■□□□□ 0.38
Cd9P40240 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.4■□□□□ 0.38
Cd9P40240 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cd9P40240 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cd9P40240 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd9P40240 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd9P40240 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cd9P40240 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd9P40240 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.39■□□□□ 0.37
Cd9P40240 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd9P40240 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd9P40240 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.39■□□□□ 0.37
Cd9P40240 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd9P40240 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.38■□□□□ 0.37
Cd9P40240 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Cd9P40240 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd9P40240 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.38■□□□□ 0.37
Cd9P40240 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.38■□□□□ 0.37
Cd9P40240 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.38■□□□□ 0.37
Cd9P40240 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd9P40240 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cd9P40240 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd9P40240 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cd9P40240 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.37■□□□□ 0.37
Cd9P40240 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.37■□□□□ 0.37
Cd9P40240 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd9P40240 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd9P40240 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd9P40240 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Gm4974-201ENSMUST00000209974 875 ntBASIC17.36■□□□□ 0.37
Cd9P40240 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.36■□□□□ 0.37
Cd9P40240 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd9P40240 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cd9P40240 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Cd9P40240 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cd9P40240 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cd9P40240 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.35■□□□□ 0.37
Cd9P40240 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.35■□□□□ 0.37
Cd9P40240 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd9P40240 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Gm12382-201ENSMUST00000122005 922 ntBASIC17.34■□□□□ 0.37
Cd9P40240 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd9P40240 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.34■□□□□ 0.37
Cd9P40240 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cd9P40240 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms