Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Fen1P39749 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Fen1P39749 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.77■□□□□ 0.43
Fen1P39749 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.76■□□□□ 0.43
Fen1P39749 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Fen1P39749 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.76■□□□□ 0.43
Fen1P39749 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.76■□□□□ 0.43
Fen1P39749 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fen1P39749 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.76■□□□□ 0.43
Fen1P39749 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fen1P39749 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Fen1P39749 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Fen1P39749 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Fen1P39749 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Fen1P39749 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fen1P39749 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Fen1P39749 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Fen1P39749 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Fen1P39749 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fen1P39749 Reep4-203ENSMUST00000226563 1444 ntBASIC17.73■□□□□ 0.43
Fen1P39749 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fen1P39749 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Fen1P39749 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fen1P39749 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Fen1P39749 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
Fen1P39749 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.73■□□□□ 0.43
Fen1P39749 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fen1P39749 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Fen1P39749 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fen1P39749 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fen1P39749 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Fen1P39749 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.72■□□□□ 0.43
Fen1P39749 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Fen1P39749 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Fen1P39749 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Fen1P39749 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Fen1P39749 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Fen1P39749 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fen1P39749 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Fen1P39749 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Fen1P39749 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Fen1P39749 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
Fen1P39749 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.71■□□□□ 0.43
Fen1P39749 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms