Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.56□□□□□ -0.08
Cdkn1aP39689 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Gm3375-201ENSMUST00000203929 796 ntBASIC14.56□□□□□ -0.08
Cdkn1aP39689 Gm29791-202ENSMUST00000207888 369 ntBASIC14.56□□□□□ -0.08
Cdkn1aP39689 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdkn1aP39689 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.56□□□□□ -0.08
Cdkn1aP39689 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.56□□□□□ -0.08
Cdkn1aP39689 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn1aP39689 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Gm43799-201ENSMUST00000201845 579 ntBASIC14.55□□□□□ -0.08
Cdkn1aP39689 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn1aP39689 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Gm13401-201ENSMUST00000117074 291 ntBASIC14.54□□□□□ -0.08
Cdkn1aP39689 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Gm4974-201ENSMUST00000209974 875 ntBASIC14.54□□□□□ -0.08
Cdkn1aP39689 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn1aP39689 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms