Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.86■□□□□ 0.29
Cdh4P39038 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdh4P39038 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Gm10418-201ENSMUST00000100943 576 ntBASIC16.85■□□□□ 0.29
Cdh4P39038 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.85■□□□□ 0.29
Cdh4P39038 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdh4P39038 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdh4P39038 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.85■□□□□ 0.29
Cdh4P39038 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh4P39038 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.84■□□□□ 0.29
Cdh4P39038 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.84■□□□□ 0.29
Cdh4P39038 Gm43183-201ENSMUST00000200632 547 ntBASIC16.84■□□□□ 0.29
Cdh4P39038 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.84■□□□□ 0.29
Cdh4P39038 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.84■□□□□ 0.29
Cdh4P39038 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
Cdh4P39038 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh4P39038 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh4P39038 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh4P39038 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh4P39038 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdh4P39038 Gm11643-201ENSMUST00000119578 864 ntBASIC16.83■□□□□ 0.28
Cdh4P39038 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.83■□□□□ 0.28
Cdh4P39038 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.83■□□□□ 0.28
Cdh4P39038 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cdh4P39038 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh4P39038 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdh4P39038 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdh4P39038 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.82■□□□□ 0.28
Cdh4P39038 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.82■□□□□ 0.28
Cdh4P39038 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.82■□□□□ 0.28
Cdh4P39038 Gm12382-201ENSMUST00000122005 922 ntBASIC16.82■□□□□ 0.28
Cdh4P39038 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.82■□□□□ 0.28
Cdh4P39038 Gm37292-201ENSMUST00000192062 758 ntBASIC16.82■□□□□ 0.28
Cdh4P39038 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdh4P39038 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdh4P39038 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdh4P39038 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh4P39038 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms