Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.56■□□□□ 0.4
LdlrP35951 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.56■□□□□ 0.4
LdlrP35951 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.56■□□□□ 0.4
LdlrP35951 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LdlrP35951 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.56■□□□□ 0.4
LdlrP35951 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.55■□□□□ 0.4
LdlrP35951 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.55■□□□□ 0.4
LdlrP35951 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.55■□□□□ 0.4
LdlrP35951 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LdlrP35951 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LdlrP35951 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.55■□□□□ 0.4
LdlrP35951 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LdlrP35951 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LdlrP35951 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LdlrP35951 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.55■□□□□ 0.4
LdlrP35951 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LdlrP35951 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LdlrP35951 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LdlrP35951 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.54■□□□□ 0.4
LdlrP35951 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.54■□□□□ 0.4
LdlrP35951 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
LdlrP35951 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Gm6211-202ENSMUST00000167849 925 ntBASIC17.54■□□□□ 0.4
LdlrP35951 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.54■□□□□ 0.4
LdlrP35951 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.54■□□□□ 0.4
LdlrP35951 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.54■□□□□ 0.4
LdlrP35951 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LdlrP35951 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LdlrP35951 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LdlrP35951 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LdlrP35951 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.53■□□□□ 0.4
LdlrP35951 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LdlrP35951 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LdlrP35951 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.53■□□□□ 0.4
LdlrP35951 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
LdlrP35951 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LdlrP35951 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.53■□□□□ 0.4
LdlrP35951 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.52■□□□□ 0.4
LdlrP35951 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.52■□□□□ 0.4
LdlrP35951 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.52■□□□□ 0.4
LdlrP35951 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LdlrP35951 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
LdlrP35951 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LdlrP35951 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LdlrP35951 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LdlrP35951 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LdlrP35951 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms