Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox5P35710 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.28■□□□□ 0.68
Sox5P35710 Gm7291-201ENSMUST00000199147 382 ntBASIC19.28■□□□□ 0.68
Sox5P35710 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox5P35710 AV356131-201ENSMUST00000206201 750 ntBASIC19.28■□□□□ 0.68
Sox5P35710 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sox5P35710 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox5P35710 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.27■□□□□ 0.68
Sox5P35710 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.27■□□□□ 0.68
Sox5P35710 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.27■□□□□ 0.68
Sox5P35710 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Gm6365-201ENSMUST00000054711 744 ntBASIC19.27■□□□□ 0.68
Sox5P35710 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sox5P35710 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sox5P35710 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox5P35710 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Sox5P35710 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sox5P35710 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.26■□□□□ 0.67
Sox5P35710 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.26■□□□□ 0.67
Sox5P35710 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.26■□□□□ 0.67
Sox5P35710 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox5P35710 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sox5P35710 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
Sox5P35710 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.25■□□□□ 0.67
Sox5P35710 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Mir8112-201ENSMUST00000184382 131 ntBASIC19.25■□□□□ 0.67
Sox5P35710 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.25■□□□□ 0.67
Sox5P35710 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.25■□□□□ 0.67
Sox5P35710 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox5P35710 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Sox5P35710 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox5P35710 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox5P35710 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox5P35710 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox5P35710 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox5P35710 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox5P35710 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox5P35710 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox5P35710 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.24■□□□□ 0.67
Sox5P35710 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sox5P35710 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.24■□□□□ 0.67
Sox5P35710 Gm29791-202ENSMUST00000207888 369 ntBASIC19.24■□□□□ 0.67
Sox5P35710 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox5P35710 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.23■□□□□ 0.67
Sox5P35710 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.23■□□□□ 0.67
Sox5P35710 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sox5P35710 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox5P35710 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sox5P35710 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms