Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Foxa1P35582 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Foxa1P35582 Gm15378-201ENSMUST00000121894 207 ntBASIC16.32■□□□□ 0.2
Foxa1P35582 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Foxa1P35582 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa1P35582 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Foxa1P35582 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.31■□□□□ 0.2
Foxa1P35582 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.31■□□□□ 0.2
Foxa1P35582 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.31■□□□□ 0.2
Foxa1P35582 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Foxa1P35582 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.31■□□□□ 0.2
Foxa1P35582 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa1P35582 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.3■□□□□ 0.2
Foxa1P35582 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
Foxa1P35582 Gm13401-201ENSMUST00000117074 291 ntBASIC16.3■□□□□ 0.2
Foxa1P35582 Gm11643-201ENSMUST00000119578 864 ntBASIC16.3■□□□□ 0.2
Foxa1P35582 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Foxa1P35582 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.3■□□□□ 0.2
Foxa1P35582 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.3■□□□□ 0.2
Foxa1P35582 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Foxa1P35582 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa1P35582 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.3■□□□□ 0.2
Foxa1P35582 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Foxa1P35582 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Gm22240-201ENSMUST00000175225 82 ntBASIC16.29■□□□□ 0.2
Foxa1P35582 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Gm37292-201ENSMUST00000192062 758 ntBASIC16.29■□□□□ 0.2
Foxa1P35582 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa1P35582 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.28■□□□□ 0.2
Foxa1P35582 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Gm6576-201ENSMUST00000169678 883 ntBASIC16.28■□□□□ 0.2
Foxa1P35582 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.28■□□□□ 0.2
Foxa1P35582 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Gm43183-201ENSMUST00000200632 547 ntBASIC16.28■□□□□ 0.2
Foxa1P35582 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms