Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.38■□□□□ 0.85
Vcam1P29533 Gm37025-201ENSMUST00000195159 829 ntBASIC20.38■□□□□ 0.85
Vcam1P29533 Gm10819-201ENSMUST00000099988 561 ntBASIC20.38■□□□□ 0.85
Vcam1P29533 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcam1P29533 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Vcam1P29533 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Vcam1P29533 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Vcam1P29533 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.37■□□□□ 0.85
Vcam1P29533 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcam1P29533 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcam1P29533 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vcam1P29533 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcam1P29533 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.37■□□□□ 0.85
Vcam1P29533 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcam1P29533 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.36■□□□□ 0.85
Vcam1P29533 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcam1P29533 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Vcam1P29533 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.35■□□□□ 0.85
Vcam1P29533 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.35■□□□□ 0.85
Vcam1P29533 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vcam1P29533 Mir8112-201ENSMUST00000184382 131 ntBASIC20.35■□□□□ 0.85
Vcam1P29533 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vcam1P29533 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.35■□□□□ 0.85
Vcam1P29533 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcam1P29533 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.34■□□□□ 0.85
Vcam1P29533 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Vcam1P29533 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Vcam1P29533 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 Gm13474-201ENSMUST00000122466 815 ntBASIC20.34■□□□□ 0.85
Vcam1P29533 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vcam1P29533 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.34■□□□□ 0.85
Vcam1P29533 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vcam1P29533 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcam1P29533 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcam1P29533 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
Vcam1P29533 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcam1P29533 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcam1P29533 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.33■□□□□ 0.85
Vcam1P29533 Gm7367-201ENSMUST00000057611 492 ntBASIC20.33■□□□□ 0.85
Vcam1P29533 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcam1P29533 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vcam1P29533 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vcam1P29533 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vcam1P29533 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vcam1P29533 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Vcam1P29533 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Vcam1P29533 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vcam1P29533 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Gm17661-201ENSMUST00000170317 270 ntBASIC20.32■□□□□ 0.84
Vcam1P29533 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vcam1P29533 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vcam1P29533 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.32■□□□□ 0.84
Vcam1P29533 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Vcam1P29533 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.31■□□□□ 0.84
Vcam1P29533 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms