Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Nckap1P28660 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Nckap1P28660 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Nckap1P28660 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Nckap1P28660 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Gm38027-201ENSMUST00000192315 235 ntBASIC17.54■□□□□ 0.4
Nckap1P28660 Gm18959-201ENSMUST00000208954 655 ntBASIC17.54■□□□□ 0.4
Nckap1P28660 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.54■□□□□ 0.4
Nckap1P28660 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nckap1P28660 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.54■□□□□ 0.4
Nckap1P28660 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nckap1P28660 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.53■□□□□ 0.4
Nckap1P28660 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.53■□□□□ 0.4
Nckap1P28660 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.53■□□□□ 0.4
Nckap1P28660 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.53■□□□□ 0.4
Nckap1P28660 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nckap1P28660 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nckap1P28660 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.53■□□□□ 0.4
Nckap1P28660 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nckap1P28660 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nckap1P28660 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.52■□□□□ 0.4
Nckap1P28660 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.52■□□□□ 0.4
Nckap1P28660 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.52■□□□□ 0.4
Nckap1P28660 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.52■□□□□ 0.4
Nckap1P28660 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.52■□□□□ 0.4
Nckap1P28660 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nckap1P28660 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nckap1P28660 Tgds-204ENSMUST00000228543 1594 ntBASIC17.52■□□□□ 0.39
Nckap1P28660 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nckap1P28660 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
Nckap1P28660 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.52■□□□□ 0.39
Nckap1P28660 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nckap1P28660 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nckap1P28660 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nckap1P28660 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nckap1P28660 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.51■□□□□ 0.39
Nckap1P28660 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.51■□□□□ 0.39
Nckap1P28660 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.51■□□□□ 0.39
Nckap1P28660 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.51■□□□□ 0.39
Nckap1P28660 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nckap1P28660 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nckap1P28660 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nckap1P28660 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms