Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.47■□□□□ 0.87
Pde6aP27664 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Pde6aP27664 Gm10517-202ENSMUST00000192970 758 ntBASIC20.47■□□□□ 0.87
Pde6aP27664 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pde6aP27664 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.47■□□□□ 0.87
Pde6aP27664 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.47■□□□□ 0.87
Pde6aP27664 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.46■□□□□ 0.87
Pde6aP27664 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.46■□□□□ 0.87
Pde6aP27664 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.46■□□□□ 0.87
Pde6aP27664 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pde6aP27664 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6aP27664 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pde6aP27664 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pde6aP27664 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.45■□□□□ 0.86
Pde6aP27664 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.45■□□□□ 0.86
Pde6aP27664 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pde6aP27664 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pde6aP27664 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6aP27664 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.44■□□□□ 0.86
Pde6aP27664 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6aP27664 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.44■□□□□ 0.86
Pde6aP27664 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6aP27664 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.44■□□□□ 0.86
Pde6aP27664 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6aP27664 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.44■□□□□ 0.86
Pde6aP27664 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pde6aP27664 Gm4974-201ENSMUST00000209974 875 ntBASIC20.44■□□□□ 0.86
Pde6aP27664 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6aP27664 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6aP27664 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pde6aP27664 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pde6aP27664 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.43■□□□□ 0.86
Pde6aP27664 Gm715-201ENSMUST00000117865 831 ntBASIC20.43■□□□□ 0.86
Pde6aP27664 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.43■□□□□ 0.86
Pde6aP27664 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.43■□□□□ 0.86
Pde6aP27664 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6aP27664 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.42■□□□□ 0.86
Pde6aP27664 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6aP27664 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pde6aP27664 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.42■□□□□ 0.86
Pde6aP27664 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6aP27664 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.42■□□□□ 0.86
Pde6aP27664 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.42■□□□□ 0.86
Pde6aP27664 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6aP27664 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pde6aP27664 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6aP27664 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6aP27664 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.42■□□□□ 0.86
Pde6aP27664 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6aP27664 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pde6aP27664 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.41■□□□□ 0.86
Pde6aP27664 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.41■□□□□ 0.86
Pde6aP27664 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6aP27664 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pde6aP27664 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.4■□□□□ 0.86
Pde6aP27664 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.4■□□□□ 0.86
Pde6aP27664 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms