Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.74□□□□□ -0.05
Col8a2P25318 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.74□□□□□ -0.05
Col8a2P25318 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col8a2P25318 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.74□□□□□ -0.05
Col8a2P25318 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col8a2P25318 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.74□□□□□ -0.05
Col8a2P25318 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.74□□□□□ -0.05
Col8a2P25318 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Col8a2P25318 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col8a2P25318 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col8a2P25318 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col8a2P25318 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col8a2P25318 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col8a2P25318 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col8a2P25318 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Col8a2P25318 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.72□□□□□ -0.05
Col8a2P25318 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.72□□□□□ -0.05
Col8a2P25318 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col8a2P25318 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col8a2P25318 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.71□□□□□ -0.05
Col8a2P25318 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Col8a2P25318 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.71□□□□□ -0.05
Col8a2P25318 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col8a2P25318 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col8a2P25318 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col8a2P25318 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col8a2P25318 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col8a2P25318 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col8a2P25318 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.71□□□□□ -0.05
Col8a2P25318 Gm43799-201ENSMUST00000201845 579 ntBASIC14.71□□□□□ -0.05
Col8a2P25318 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.71□□□□□ -0.05
Col8a2P25318 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col8a2P25318 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col8a2P25318 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col8a2P25318 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col8a2P25318 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.7□□□□□ -0.06
Col8a2P25318 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms