Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Pde6bP23440 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pde6bP23440 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.2■□□□□ 0.66
Pde6bP23440 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pde6bP23440 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6bP23440 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
Pde6bP23440 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.19■□□□□ 0.66
Pde6bP23440 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6bP23440 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.18■□□□□ 0.66
Pde6bP23440 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.18■□□□□ 0.66
Pde6bP23440 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.18■□□□□ 0.66
Pde6bP23440 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.18■□□□□ 0.66
Pde6bP23440 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.18■□□□□ 0.66
Pde6bP23440 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.18■□□□□ 0.66
Pde6bP23440 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Pde6bP23440 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pde6bP23440 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pde6bP23440 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6bP23440 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.17■□□□□ 0.66
Pde6bP23440 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Gm12085-201ENSMUST00000119263 940 ntBASIC19.17■□□□□ 0.66
Pde6bP23440 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.17■□□□□ 0.66
Pde6bP23440 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.17■□□□□ 0.66
Pde6bP23440 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pde6bP23440 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.17■□□□□ 0.66
Pde6bP23440 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6bP23440 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.16■□□□□ 0.66
Pde6bP23440 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.16■□□□□ 0.66
Pde6bP23440 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.16■□□□□ 0.66
Pde6bP23440 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6bP23440 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.15■□□□□ 0.66
Pde6bP23440 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pde6bP23440 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Pde6bP23440 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.15■□□□□ 0.66
Pde6bP23440 Gm27463-201ENSMUST00000183569 57 ntBASIC19.15■□□□□ 0.66
Pde6bP23440 Gm10517-202ENSMUST00000192970 758 ntBASIC19.15■□□□□ 0.66
Pde6bP23440 Gm18959-201ENSMUST00000208954 655 ntBASIC19.15■□□□□ 0.66
Pde6bP23440 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pde6bP23440 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pde6bP23440 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6bP23440 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms