Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdx1P18111 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx1P18111 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx1P18111 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
Cdx1P18111 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdx1P18111 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdx1P18111 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdx1P18111 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdx1P18111 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdx1P18111 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cdx1P18111 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdx1P18111 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx1P18111 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdx1P18111 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdx1P18111 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.22□□□□□ -0.13
Cdx1P18111 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Cdx1P18111 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdx1P18111 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdx1P18111 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cdx1P18111 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.22□□□□□ -0.13
Cdx1P18111 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdx1P18111 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdx1P18111 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdx1P18111 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cdx1P18111 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdx1P18111 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cdx1P18111 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdx1P18111 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cdx1P18111 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Cdx1P18111 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdx1P18111 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx1P18111 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx1P18111 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx1P18111 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdx1P18111 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdx1P18111 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdx1P18111 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdx1P18111 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdx1P18111 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.2□□□□□ -0.14
Cdx1P18111 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.2□□□□□ -0.14
Cdx1P18111 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdx1P18111 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdx1P18111 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdx1P18111 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdx1P18111 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.2□□□□□ -0.14
Cdx1P18111 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms