Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.05■□□□□ 0.8
Kcna1P16388 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.04■□□□□ 0.8
Kcna1P16388 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.04■□□□□ 0.8
Kcna1P16388 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.04■□□□□ 0.8
Kcna1P16388 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Kcna1P16388 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcna1P16388 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.03■□□□□ 0.8
Kcna1P16388 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.03■□□□□ 0.8
Kcna1P16388 Gm4974-201ENSMUST00000209974 875 ntBASIC20.03■□□□□ 0.8
Kcna1P16388 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.03■□□□□ 0.8
Kcna1P16388 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcna1P16388 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Kcna1P16388 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.03■□□□□ 0.8
Kcna1P16388 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Kcna1P16388 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcna1P16388 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Kcna1P16388 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcna1P16388 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcna1P16388 Gm12085-201ENSMUST00000119263 940 ntBASIC20.02■□□□□ 0.8
Kcna1P16388 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.02■□□□□ 0.8
Kcna1P16388 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.02■□□□□ 0.8
Kcna1P16388 Gm5417-201ENSMUST00000079706 384 ntBASIC20.02■□□□□ 0.8
Kcna1P16388 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Kcna1P16388 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.02■□□□□ 0.8
Kcna1P16388 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcna1P16388 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.02■□□□□ 0.8
Kcna1P16388 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Kcna1P16388 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Kcna1P16388 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcna1P16388 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.01■□□□□ 0.79
Kcna1P16388 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcna1P16388 Rarb-207ENSMUST00000225921 2756 ntBASIC20.01■□□□□ 0.79
Kcna1P16388 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcna1P16388 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcna1P16388 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20■□□□□ 0.79
Kcna1P16388 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Gm15565-201ENSMUST00000118890 427 ntBASIC20■□□□□ 0.79
Kcna1P16388 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20■□□□□ 0.79
Kcna1P16388 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20■□□□□ 0.79
Kcna1P16388 Gm3375-201ENSMUST00000203929 796 ntBASIC20■□□□□ 0.79
Kcna1P16388 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
Kcna1P16388 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Kcna1P16388 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Kcna1P16388 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20■□□□□ 0.79
Kcna1P16388 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20■□□□□ 0.79
Kcna1P16388 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcna1P16388 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.99■□□□□ 0.79
Kcna1P16388 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kcna1P16388 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcna1P16388 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Kcna1P16388 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kcna1P16388 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcna1P16388 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kcna1P16388 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.98■□□□□ 0.79
Kcna1P16388 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.98■□□□□ 0.79
Kcna1P16388 Timm23-208ENSMUST00000226683 750 ntBASIC19.98■□□□□ 0.79
Kcna1P16388 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Kcna1P16388 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Kcna1P16388 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kcna1P16388 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms