Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd44P15379 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd44P15379 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd44P15379 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cd44P15379 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.54■□□□□ 0.56
Cd44P15379 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cd44P15379 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.54■□□□□ 0.56
Cd44P15379 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd44P15379 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Cd44P15379 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Gm10849-201ENSMUST00000100397 618 ntBASIC18.53■□□□□ 0.56
Cd44P15379 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.53■□□□□ 0.56
Cd44P15379 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
Cd44P15379 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Mir8112-201ENSMUST00000184382 131 ntBASIC18.53■□□□□ 0.56
Cd44P15379 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.53■□□□□ 0.56
Cd44P15379 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd44P15379 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cd44P15379 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd44P15379 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.52■□□□□ 0.56
Cd44P15379 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd44P15379 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd44P15379 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.52■□□□□ 0.56
Cd44P15379 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.52■□□□□ 0.56
Cd44P15379 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cd44P15379 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd44P15379 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cd44P15379 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cd44P15379 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.51■□□□□ 0.55
Cd44P15379 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cd44P15379 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.51■□□□□ 0.55
Cd44P15379 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd44P15379 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cd44P15379 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.51■□□□□ 0.55
Cd44P15379 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.51■□□□□ 0.55
Cd44P15379 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Cd44P15379 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Gm2399-201ENSMUST00000104944 225 ntBASIC18.5■□□□□ 0.55
Cd44P15379 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd44P15379 Gm6211-202ENSMUST00000167849 925 ntBASIC18.5■□□□□ 0.55
Cd44P15379 Gm29791-202ENSMUST00000207888 369 ntBASIC18.5■□□□□ 0.55
Cd44P15379 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Zfp783-201ENSMUST00000095946 670 ntBASIC18.5■□□□□ 0.55
Cd44P15379 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd44P15379 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd44P15379 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.49■□□□□ 0.55
Cd44P15379 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cd44P15379 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cd44P15379 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cd44P15379 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cd44P15379 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cd44P15379 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cd44P15379 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd44P15379 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd44P15379 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd44P15379 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms