Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
P06328 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.93□□□□□ -0.34
P06328 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.93□□□□□ -0.34
P06328 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.93□□□□□ -0.34
P06328 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.93□□□□□ -0.34
P06328 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.93□□□□□ -0.34
P06328 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P06328 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P06328 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.92□□□□□ -0.34
P06328 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
P06328 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Gm6365-201ENSMUST00000054711 744 ntBASIC12.92□□□□□ -0.34
P06328 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.92□□□□□ -0.34
P06328 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.92□□□□□ -0.34
P06328 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P06328 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
P06328 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.92□□□□□ -0.34
P06328 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P06328 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06328 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.91□□□□□ -0.34
P06328 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.91□□□□□ -0.34
P06328 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.91□□□□□ -0.34
P06328 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.91□□□□□ -0.34
P06328 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
P06328 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
P06328 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.91□□□□□ -0.34
P06328 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.91□□□□□ -0.34
P06328 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
P06328 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
P06328 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P06328 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.9□□□□□ -0.34
P06328 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P06328 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
P06328 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.9□□□□□ -0.34
P06328 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.9□□□□□ -0.34
P06328 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P06328 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
P06328 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.9□□□□□ -0.34
P06328 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P06328 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
P06328 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06328 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06328 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06328 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P06328 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06328 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06328 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms