Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PrnpP04925 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PrnpP04925 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.32■□□□□ 0.52
PrnpP04925 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.32■□□□□ 0.52
PrnpP04925 Gm9013-201ENSMUST00000132939 882 ntBASIC18.32■□□□□ 0.52
PrnpP04925 Gm5587-201ENSMUST00000206270 674 ntBASIC18.32■□□□□ 0.52
PrnpP04925 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PrnpP04925 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PrnpP04925 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PrnpP04925 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PrnpP04925 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.31■□□□□ 0.52
PrnpP04925 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.31■□□□□ 0.52
PrnpP04925 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrnpP04925 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
PrnpP04925 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.3■□□□□ 0.52
PrnpP04925 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.3■□□□□ 0.52
PrnpP04925 Gm7213-201ENSMUST00000215977 950 ntBASIC18.3■□□□□ 0.52
PrnpP04925 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.3■□□□□ 0.52
PrnpP04925 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PrnpP04925 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrnpP04925 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PrnpP04925 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.29■□□□□ 0.52
PrnpP04925 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.29■□□□□ 0.52
PrnpP04925 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PrnpP04925 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PrnpP04925 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PrnpP04925 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.29■□□□□ 0.52
PrnpP04925 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrnpP04925 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PrnpP04925 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PrnpP04925 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.28■□□□□ 0.52
PrnpP04925 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.28■□□□□ 0.52
PrnpP04925 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PrnpP04925 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PrnpP04925 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PrnpP04925 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PrnpP04925 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrnpP04925 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PrnpP04925 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PrnpP04925 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PrnpP04925 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PrnpP04925 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.26■□□□□ 0.51
PrnpP04925 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.26■□□□□ 0.51
PrnpP04925 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.26■□□□□ 0.51
PrnpP04925 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PrnpP04925 Gm27704-201ENSMUST00000185094 107 ntBASIC18.26■□□□□ 0.51
PrnpP04925 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrnpP04925 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms