Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfb1P04202 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfb1P04202 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfb1P04202 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Tgfb1P04202 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfb1P04202 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfb1P04202 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfb1P04202 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfb1P04202 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Tgfb1P04202 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfb1P04202 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.33■□□□□ 0.2
Tgfb1P04202 Gm2559-201ENSMUST00000201323 363 ntBASIC16.33■□□□□ 0.2
Tgfb1P04202 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.33■□□□□ 0.2
Tgfb1P04202 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tgfb1P04202 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.33■□□□□ 0.2
Tgfb1P04202 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Tgfb1P04202 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfb1P04202 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
Tgfb1P04202 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.32■□□□□ 0.2
Tgfb1P04202 Gm29791-202ENSMUST00000207888 369 ntBASIC16.32■□□□□ 0.2
Tgfb1P04202 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfb1P04202 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Tgfb1P04202 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tgfb1P04202 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.31■□□□□ 0.2
Tgfb1P04202 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Gm11249-201ENSMUST00000117071 859 ntBASIC16.31■□□□□ 0.2
Tgfb1P04202 Gm12896-201ENSMUST00000118430 226 ntBASIC16.31■□□□□ 0.2
Tgfb1P04202 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tgfb1P04202 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.31■□□□□ 0.2
Tgfb1P04202 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfb1P04202 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.31■□□□□ 0.2
Tgfb1P04202 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.3■□□□□ 0.2
Tgfb1P04202 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.3■□□□□ 0.2
Tgfb1P04202 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfb1P04202 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfb1P04202 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfb1P04202 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tgfb1P04202 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.29■□□□□ 0.2
Tgfb1P04202 Gm13401-201ENSMUST00000117074 291 ntBASIC16.29■□□□□ 0.2
Tgfb1P04202 Mir8112-201ENSMUST00000184382 131 ntBASIC16.29■□□□□ 0.2
Tgfb1P04202 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfb1P04202 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfb1P04202 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfb1P04202 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tgfb1P04202 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tgfb1P04202 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfb1P04202 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tgfb1P04202 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfb1P04202 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfb1P04202 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfb1P04202 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tgfb1P04202 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tgfb1P04202 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tgfb1P04202 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms