Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sp1O89090 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp1O89090 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Sp1O89090 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sp1O89090 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sp1O89090 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp1O89090 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sp1O89090 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sp1O89090 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp1O89090 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sp1O89090 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp1O89090 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Sp1O89090 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sp1O89090 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sp1O89090 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sp1O89090 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sp1O89090 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sp1O89090 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sp1O89090 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.85■□□□□ 0.45
Sp1O89090 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp1O89090 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sp1O89090 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp1O89090 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sp1O89090 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Sp1O89090 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp1O89090 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sp1O89090 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Sp1O89090 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp1O89090 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sp1O89090 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.84■□□□□ 0.45
Sp1O89090 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.84■□□□□ 0.45
Sp1O89090 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.84■□□□□ 0.45
Sp1O89090 Grk6-206ENSMUST00000224995 2971 ntBASIC17.84■□□□□ 0.45
Sp1O89090 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp1O89090 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sp1O89090 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Sp1O89090 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.83■□□□□ 0.44
Sp1O89090 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sp1O89090 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.83■□□□□ 0.44
Sp1O89090 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.83■□□□□ 0.44
Sp1O89090 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sp1O89090 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp1O89090 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sp1O89090 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Gm27463-201ENSMUST00000183569 57 ntBASIC17.82■□□□□ 0.44
Sp1O89090 Gm7889-201ENSMUST00000185591 958 ntBASIC17.82■□□□□ 0.44
Sp1O89090 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.82■□□□□ 0.44
Sp1O89090 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.82■□□□□ 0.44
Sp1O89090 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.82■□□□□ 0.44
Sp1O89090 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp1O89090 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.82■□□□□ 0.44
Sp1O89090 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.82■□□□□ 0.44
Sp1O89090 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.81■□□□□ 0.44
Sp1O89090 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Mir8112-201ENSMUST00000184382 131 ntBASIC17.81■□□□□ 0.44
Sp1O89090 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.81■□□□□ 0.44
Sp1O89090 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp1O89090 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms