Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a20bO88575 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a20bO88575 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.27■□□□□ 0.67
Slc6a20bO88575 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.27■□□□□ 0.67
Slc6a20bO88575 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a20bO88575 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.26■□□□□ 0.67
Slc6a20bO88575 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc6a20bO88575 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Mir770-201ENSMUST00000103252 94 ntBASIC19.25■□□□□ 0.67
Slc6a20bO88575 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Birc2-201ENSMUST00000054878 378 ntBASIC19.25■□□□□ 0.67
Slc6a20bO88575 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20bO88575 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Olfr129-201ENSMUST00000122318 993 ntBASIC19.24■□□□□ 0.67
Slc6a20bO88575 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.24■□□□□ 0.67
Slc6a20bO88575 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20bO88575 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.23■□□□□ 0.67
Slc6a20bO88575 AW822252-206ENSMUST00000208904 237 ntBASIC19.23■□□□□ 0.67
Slc6a20bO88575 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20bO88575 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Slc6a20bO88575 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Gm28659-201ENSMUST00000188013 759 ntBASIC19.22■□□□□ 0.67
Slc6a20bO88575 Gm37025-201ENSMUST00000195159 829 ntBASIC19.22■□□□□ 0.67
Slc6a20bO88575 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20bO88575 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a20bO88575 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Gm45328-201ENSMUST00000210942 917 ntBASIC19.21■□□□□ 0.67
Slc6a20bO88575 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.21■□□□□ 0.67
Slc6a20bO88575 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc6a20bO88575 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms