Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn1O88551 Gm38285-201ENSMUST00000192928 922 ntBASIC15.1■□□□□ 0.01
Cldn1O88551 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.1■□□□□ 0.01
Cldn1O88551 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn1O88551 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cldn1O88551 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn1O88551 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.09■□□□□ 0.01
Cldn1O88551 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldn1O88551 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.09■□□□□ 0.01
Cldn1O88551 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.09■□□□□ 0.01
Cldn1O88551 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldn1O88551 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn1O88551 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cldn1O88551 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cldn1O88551 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.08■□□□□ 0
Cldn1O88551 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Mir5130-201ENSMUST00000175160 84 ntBASIC15.08■□□□□ 0
Cldn1O88551 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cldn1O88551 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cldn1O88551 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cldn1O88551 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cldn1O88551 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cldn1O88551 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.08■□□□□ 0
Cldn1O88551 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cldn1O88551 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cldn1O88551 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.07■□□□□ 0
Cldn1O88551 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cldn1O88551 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.07■□□□□ 0
Cldn1O88551 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cldn1O88551 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cldn1O88551 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cldn1O88551 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cldn1O88551 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Cldn1O88551 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cldn1O88551 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Gm12085-201ENSMUST00000119263 940 ntBASIC15.06■□□□□ 0
Cldn1O88551 Gm7284-201ENSMUST00000131667 944 ntBASIC15.06■□□□□ 0
Cldn1O88551 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cldn1O88551 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cldn1O88551 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cldn1O88551 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cldn1O88551 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cldn1O88551 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cldn1O88551 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cldn1O88551 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cldn1O88551 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms