Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cacna1bO55017 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17■□□□□ 0.31
Cacna1bO55017 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Gm18958-201ENSMUST00000174258 762 ntBASIC16.99■□□□□ 0.31
Cacna1bO55017 Mir3081-201ENSMUST00000175305 84 ntBASIC16.99■□□□□ 0.31
Cacna1bO55017 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.99■□□□□ 0.31
Cacna1bO55017 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.99■□□□□ 0.31
Cacna1bO55017 Gm7370-201ENSMUST00000219471 767 ntBASIC16.99■□□□□ 0.31
Cacna1bO55017 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cacna1bO55017 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.99■□□□□ 0.31
Cacna1bO55017 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1bO55017 Gm11355-201ENSMUST00000121120 306 ntBASIC16.98■□□□□ 0.31
Cacna1bO55017 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.98■□□□□ 0.31
Cacna1bO55017 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1bO55017 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cacna1bO55017 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.98■□□□□ 0.31
Cacna1bO55017 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.98■□□□□ 0.31
Cacna1bO55017 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.98■□□□□ 0.31
Cacna1bO55017 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cacna1bO55017 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.98■□□□□ 0.31
Cacna1bO55017 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1bO55017 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.97■□□□□ 0.31
Cacna1bO55017 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.97■□□□□ 0.31
Cacna1bO55017 Gm27459-201ENSMUST00000184860 107 ntBASIC16.97■□□□□ 0.31
Cacna1bO55017 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.97■□□□□ 0.31
Cacna1bO55017 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1bO55017 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.96■□□□□ 0.31
Cacna1bO55017 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.96■□□□□ 0.31
Cacna1bO55017 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Gm34391-201ENSMUST00000203706 907 ntBASIC16.96■□□□□ 0.31
Cacna1bO55017 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Cacna1bO55017 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Cacna1bO55017 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1bO55017 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cacna1bO55017 Birc2-201ENSMUST00000054878 378 ntBASIC16.96■□□□□ 0.3
Cacna1bO55017 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cacna1bO55017 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.96■□□□□ 0.3
Cacna1bO55017 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Olfr129-201ENSMUST00000122318 993 ntBASIC16.95■□□□□ 0.3
Cacna1bO55017 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Gm11950-201ENSMUST00000121615 838 ntBASIC16.95■□□□□ 0.3
Cacna1bO55017 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Cacna1bO55017 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1bO55017 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.94■□□□□ 0.3
Cacna1bO55017 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms