Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
Itgb3O54890 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.71■□□□□ 0.59
Itgb3O54890 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Itgb3O54890 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.71■□□□□ 0.59
Itgb3O54890 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.71■□□□□ 0.59
Itgb3O54890 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.71■□□□□ 0.59
Itgb3O54890 Gm4974-201ENSMUST00000209974 875 ntBASIC18.71■□□□□ 0.59
Itgb3O54890 Odf3b-204ENSMUST00000227834 930 ntBASIC18.71■□□□□ 0.59
Itgb3O54890 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Itgb3O54890 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3O54890 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Itgb3O54890 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.7■□□□□ 0.58
Itgb3O54890 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Gm12085-201ENSMUST00000119263 940 ntBASIC18.7■□□□□ 0.58
Itgb3O54890 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.7■□□□□ 0.58
Itgb3O54890 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.7■□□□□ 0.58
Itgb3O54890 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.7■□□□□ 0.58
Itgb3O54890 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Itgb3O54890 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.7■□□□□ 0.58
Itgb3O54890 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Itgb3O54890 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3O54890 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.7■□□□□ 0.58
Itgb3O54890 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Itgb3O54890 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.69■□□□□ 0.58
Itgb3O54890 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Itgb3O54890 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.69■□□□□ 0.58
Itgb3O54890 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.69■□□□□ 0.58
Itgb3O54890 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.69■□□□□ 0.58
Itgb3O54890 Gm3375-201ENSMUST00000203929 796 ntBASIC18.69■□□□□ 0.58
Itgb3O54890 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Itgb3O54890 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.69■□□□□ 0.58
Itgb3O54890 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3O54890 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Itgb3O54890 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.68■□□□□ 0.58
Itgb3O54890 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Itgb3O54890 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3O54890 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3O54890 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.67■□□□□ 0.58
Itgb3O54890 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3O54890 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3O54890 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Itgb3O54890 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3O54890 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Itgb3O54890 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3O54890 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Itgb3O54890 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms