Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Per1O35973 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Per1O35973 Gm13559-201ENSMUST00000120476 863 ntBASIC19.19■□□□□ 0.66
Per1O35973 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.19■□□□□ 0.66
Per1O35973 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Per1O35973 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Per1O35973 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.19■□□□□ 0.66
Per1O35973 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Per1O35973 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Per1O35973 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Per1O35973 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.19■□□□□ 0.66
Per1O35973 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Per1O35973 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Per1O35973 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.18■□□□□ 0.66
Per1O35973 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.18■□□□□ 0.66
Per1O35973 Gm11539-201ENSMUST00000119837 557 ntBASIC19.18■□□□□ 0.66
Per1O35973 Gm13436-201ENSMUST00000120418 567 ntBASIC19.18■□□□□ 0.66
Per1O35973 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Per1O35973 Gm43799-201ENSMUST00000201845 579 ntBASIC19.18■□□□□ 0.66
Per1O35973 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.18■□□□□ 0.66
Per1O35973 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Per1O35973 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.18■□□□□ 0.66
Per1O35973 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per1O35973 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.17■□□□□ 0.66
Per1O35973 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 Gm7638-201ENSMUST00000121348 967 ntBASIC19.17■□□□□ 0.66
Per1O35973 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Per1O35973 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.17■□□□□ 0.66
Per1O35973 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per1O35973 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Per1O35973 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.16■□□□□ 0.66
Per1O35973 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Per1O35973 Gm6433-201ENSMUST00000118634 875 ntBASIC19.16■□□□□ 0.66
Per1O35973 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Per1O35973 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.16■□□□□ 0.66
Per1O35973 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per1O35973 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Per1O35973 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.15■□□□□ 0.66
Per1O35973 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Per1O35973 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Per1O35973 Gm27463-201ENSMUST00000183569 57 ntBASIC19.15■□□□□ 0.66
Per1O35973 Gm8969-201ENSMUST00000199694 526 ntBASIC19.15■□□□□ 0.66
Per1O35973 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Per1O35973 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Per1O35973 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per1O35973 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Per1O35973 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Per1O35973 Gm37025-201ENSMUST00000195159 829 ntBASIC19.14■□□□□ 0.65
Per1O35973 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.14■□□□□ 0.65
Per1O35973 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per1O35973 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.14■□□□□ 0.65
Per1O35973 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per1O35973 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per1O35973 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per1O35973 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.14■□□□□ 0.65
Per1O35973 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.14■□□□□ 0.65
Per1O35973 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per1O35973 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per1O35973 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms