Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.03■□□□□ 0.16
Matn3O35701 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.03■□□□□ 0.16
Matn3O35701 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.03■□□□□ 0.16
Matn3O35701 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Matn3O35701 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Matn3O35701 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn3O35701 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Matn3O35701 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Matn3O35701 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Matn3O35701 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.02■□□□□ 0.16
Matn3O35701 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Matn3O35701 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.02■□□□□ 0.16
Matn3O35701 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Matn3O35701 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn3O35701 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn3O35701 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn3O35701 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Matn3O35701 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Matn3O35701 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Matn3O35701 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn3O35701 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.02■□□□□ 0.15
Matn3O35701 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.01■□□□□ 0.15
Matn3O35701 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Matn3O35701 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Matn3O35701 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Matn3O35701 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Matn3O35701 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.01■□□□□ 0.15
Matn3O35701 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.01■□□□□ 0.15
Matn3O35701 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Matn3O35701 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn3O35701 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.01■□□□□ 0.15
Matn3O35701 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16■□□□□ 0.15
Matn3O35701 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Matn3O35701 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16■□□□□ 0.15
Matn3O35701 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16■□□□□ 0.15
Matn3O35701 Spcs1-204ENSMUST00000226782 949 ntBASIC16■□□□□ 0.15
Matn3O35701 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Gm5576-201ENSMUST00000075809 1236 ntBASIC16■□□□□ 0.15
Matn3O35701 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Matn3O35701 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Matn3O35701 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn3O35701 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Matn3O35701 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Matn3O35701 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Matn3O35701 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms