Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Gm12933-201ENSMUST00000120203 872 ntBASIC18.98■□□□□ 0.63
Nr1i3O35627 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.98■□□□□ 0.63
Nr1i3O35627 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.98■□□□□ 0.63
Nr1i3O35627 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.97■□□□□ 0.63
Nr1i3O35627 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.97■□□□□ 0.63
Nr1i3O35627 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1i3O35627 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.96■□□□□ 0.63
Nr1i3O35627 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr1i3O35627 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1i3O35627 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Nr1i3O35627 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.95■□□□□ 0.62
Nr1i3O35627 Mir6349-201ENSMUST00000184059 97 ntBASIC18.95■□□□□ 0.62
Nr1i3O35627 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.95■□□□□ 0.62
Nr1i3O35627 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.95■□□□□ 0.62
Nr1i3O35627 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.95■□□□□ 0.62
Nr1i3O35627 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Nr1i3O35627 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.95■□□□□ 0.62
Nr1i3O35627 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.95■□□□□ 0.62
Nr1i3O35627 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1i3O35627 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1i3O35627 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nr1i3O35627 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1i3O35627 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.94■□□□□ 0.62
Nr1i3O35627 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nr1i3O35627 Gm11643-201ENSMUST00000119578 864 ntBASIC18.94■□□□□ 0.62
Nr1i3O35627 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1i3O35627 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1i3O35627 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.94■□□□□ 0.62
Nr1i3O35627 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1i3O35627 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.94■□□□□ 0.62
Nr1i3O35627 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.94■□□□□ 0.62
Nr1i3O35627 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.94■□□□□ 0.62
Nr1i3O35627 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1i3O35627 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.93■□□□□ 0.62
Nr1i3O35627 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.93■□□□□ 0.62
Nr1i3O35627 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.93■□□□□ 0.62
Nr1i3O35627 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Nr1i3O35627 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.93■□□□□ 0.62
Nr1i3O35627 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nr1i3O35627 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1i3O35627 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1i3O35627 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.92■□□□□ 0.62
Nr1i3O35627 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Nr1i3O35627 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms