Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Npc1O35604 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Npc1O35604 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.2■□□□□ 0.34
Npc1O35604 Gm10252-201ENSMUST00000209541 832 ntBASIC17.2■□□□□ 0.34
Npc1O35604 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Npc1O35604 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Npc1O35604 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Npc1O35604 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.19■□□□□ 0.34
Npc1O35604 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Npc1O35604 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.19■□□□□ 0.34
Npc1O35604 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.19■□□□□ 0.34
Npc1O35604 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npc1O35604 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.18■□□□□ 0.34
Npc1O35604 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Npc1O35604 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Npc1O35604 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.18■□□□□ 0.34
Npc1O35604 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Npc1O35604 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Npc1O35604 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.18■□□□□ 0.34
Npc1O35604 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npc1O35604 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Npc1O35604 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Npc1O35604 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.17■□□□□ 0.34
Npc1O35604 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Npc1O35604 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Npc1O35604 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.17■□□□□ 0.34
Npc1O35604 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npc1O35604 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Npc1O35604 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Gm10418-201ENSMUST00000100943 576 ntBASIC17.16■□□□□ 0.34
Npc1O35604 Gm11643-201ENSMUST00000119578 864 ntBASIC17.16■□□□□ 0.34
Npc1O35604 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.16■□□□□ 0.34
Npc1O35604 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Mir2861-201ENSMUST00000175539 82 ntBASIC17.16■□□□□ 0.34
Npc1O35604 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.16■□□□□ 0.34
Npc1O35604 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.16■□□□□ 0.34
Npc1O35604 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.16■□□□□ 0.34
Npc1O35604 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Npc1O35604 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.16■□□□□ 0.34
Npc1O35604 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Npc1O35604 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Npc1O35604 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Npc1O35604 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Npc1O35604 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Npc1O35604 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.15■□□□□ 0.34
Npc1O35604 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Npc1O35604 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.15■□□□□ 0.34
Npc1O35604 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms