Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Slc1a6O35544 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.42■□□□□ 0.38
Slc1a6O35544 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.42■□□□□ 0.38
Slc1a6O35544 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Slc1a6O35544 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.42■□□□□ 0.38
Slc1a6O35544 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.41■□□□□ 0.38
Slc1a6O35544 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc1a6O35544 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Slc1a6O35544 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Slc1a6O35544 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc1a6O35544 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc1a6O35544 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc1a6O35544 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc1a6O35544 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc1a6O35544 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Slc1a6O35544 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc1a6O35544 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc1a6O35544 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc1a6O35544 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Slc1a6O35544 Gm6420-201ENSMUST00000193885 723 ntBASIC17.39■□□□□ 0.37
Slc1a6O35544 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc1a6O35544 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc1a6O35544 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Slc1a6O35544 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.38■□□□□ 0.37
Slc1a6O35544 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Slc1a6O35544 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.38■□□□□ 0.37
Slc1a6O35544 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.38■□□□□ 0.37
Slc1a6O35544 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Slc1a6O35544 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.38■□□□□ 0.37
Slc1a6O35544 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc1a6O35544 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms