Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.88■□□□□ 0.77
Stx1aO35526 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Stx1aO35526 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Stx1aO35526 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Stx1aO35526 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.88■□□□□ 0.77
Stx1aO35526 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Stx1aO35526 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Stx1aO35526 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Stx1aO35526 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Stx1aO35526 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Stx1aO35526 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.86■□□□□ 0.77
Stx1aO35526 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.86■□□□□ 0.77
Stx1aO35526 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Stx1aO35526 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Stx1aO35526 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Stx1aO35526 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Stx1aO35526 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Stx1aO35526 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.85■□□□□ 0.77
Stx1aO35526 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.85■□□□□ 0.77
Stx1aO35526 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.85■□□□□ 0.77
Stx1aO35526 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.85■□□□□ 0.77
Stx1aO35526 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Stx1aO35526 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Stx1aO35526 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Stx1aO35526 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Stx1aO35526 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.84■□□□□ 0.77
Stx1aO35526 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Stx1aO35526 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.83■□□□□ 0.77
Stx1aO35526 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stx1aO35526 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stx1aO35526 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stx1aO35526 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.83■□□□□ 0.77
Stx1aO35526 Gm42778-201ENSMUST00000199644 553 ntBASIC19.83■□□□□ 0.77
Stx1aO35526 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Stx1aO35526 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Stx1aO35526 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stx1aO35526 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stx1aO35526 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.83■□□□□ 0.76
Stx1aO35526 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stx1aO35526 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stx1aO35526 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stx1aO35526 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Stx1aO35526 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.83■□□□□ 0.76
Stx1aO35526 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stx1aO35526 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stx1aO35526 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stx1aO35526 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms