Protein–RNA interactions for Protein: O35427

Crcp, DNA-directed RNA polymerase III subunit RPC9, mousemouse

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrcpO35427 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.02■□□□□ 0.96
CrcpO35427 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Gm29791-202ENSMUST00000207888 369 ntBASIC21.02■□□□□ 0.96
CrcpO35427 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CrcpO35427 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CrcpO35427 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CrcpO35427 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.02■□□□□ 0.95
CrcpO35427 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.02■□□□□ 0.95
CrcpO35427 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CrcpO35427 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CrcpO35427 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CrcpO35427 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CrcpO35427 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CrcpO35427 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.01■□□□□ 0.95
CrcpO35427 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CrcpO35427 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.01■□□□□ 0.95
CrcpO35427 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CrcpO35427 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CrcpO35427 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21■□□□□ 0.95
CrcpO35427 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21■□□□□ 0.95
CrcpO35427 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CrcpO35427 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CrcpO35427 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.99■□□□□ 0.95
CrcpO35427 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.99■□□□□ 0.95
CrcpO35427 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CrcpO35427 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CrcpO35427 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.99■□□□□ 0.95
CrcpO35427 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.99■□□□□ 0.95
CrcpO35427 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.99■□□□□ 0.95
CrcpO35427 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.99■□□□□ 0.95
CrcpO35427 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CrcpO35427 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CrcpO35427 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.98■□□□□ 0.95
CrcpO35427 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.98■□□□□ 0.95
CrcpO35427 Mir5122-201ENSMUST00000175004 89 ntBASIC20.98■□□□□ 0.95
CrcpO35427 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CrcpO35427 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CrcpO35427 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CrcpO35427 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CrcpO35427 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CrcpO35427 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CrcpO35427 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CrcpO35427 Gm37055-201ENSMUST00000191866 133 ntBASIC20.97■□□□□ 0.95
CrcpO35427 Gm10517-202ENSMUST00000192970 758 ntBASIC20.97■□□□□ 0.95
CrcpO35427 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms