Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Golph3-205ENSMUST00000228671 2842 ntBASIC22.7■■□□□ 1.22
Col15a1O35206 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col15a1O35206 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col15a1O35206 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col15a1O35206 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Col15a1O35206 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Col15a1O35206 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Col15a1O35206 Actl10-202ENSMUST00000226583 1501 ntBASIC22.69■■□□□ 1.22
Col15a1O35206 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Col15a1O35206 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Col15a1O35206 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC22.69■■□□□ 1.22
Col15a1O35206 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col15a1O35206 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC22.68■■□□□ 1.22
Col15a1O35206 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC22.68■■□□□ 1.22
Col15a1O35206 Gm11860-201ENSMUST00000122346 1010 ntBASIC22.68■■□□□ 1.22
Col15a1O35206 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC22.68■■□□□ 1.22
Col15a1O35206 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC22.68■■□□□ 1.22
Col15a1O35206 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col15a1O35206 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Col15a1O35206 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Col15a1O35206 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Col15a1O35206 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.67■■□□□ 1.22
Col15a1O35206 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Col15a1O35206 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col15a1O35206 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col15a1O35206 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col15a1O35206 Gm27357-201ENSMUST00000183754 135 ntBASIC22.66■■□□□ 1.22
Col15a1O35206 Umpk-ps-201ENSMUST00000211897 827 ntBASIC22.66■■□□□ 1.22
Col15a1O35206 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.66■■□□□ 1.22
Col15a1O35206 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Col15a1O35206 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col15a1O35206 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Col15a1O35206 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col15a1O35206 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
Col15a1O35206 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC22.65■■□□□ 1.22
Col15a1O35206 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC22.65■■□□□ 1.22
Col15a1O35206 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
Col15a1O35206 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col15a1O35206 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Col15a1O35206 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col15a1O35206 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Col15a1O35206 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col15a1O35206 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col15a1O35206 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col15a1O35206 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col15a1O35206 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col15a1O35206 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC22.64■■□□□ 1.21
Col15a1O35206 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col15a1O35206 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col15a1O35206 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Otx2os1-206ENSMUST00000228153 787 ntBASIC22.63■■□□□ 1.21
Col15a1O35206 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Col15a1O35206 Gm7461-201ENSMUST00000058918 827 ntBASIC22.63■■□□□ 1.21
Col15a1O35206 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Col15a1O35206 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.63■■□□□ 1.21
Col15a1O35206 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC22.63■■□□□ 1.21
Col15a1O35206 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col15a1O35206 Gm37722-201ENSMUST00000193757 208 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms