Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm13168-201ENSMUST00000121771 632 ntBASIC18.07■□□□□ 0.48
Ercc2O08811 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc2O08811 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc2O08811 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.07■□□□□ 0.48
Ercc2O08811 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.07■□□□□ 0.48
Ercc2O08811 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc2O08811 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Ercc2O08811 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc2O08811 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc2O08811 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
Ercc2O08811 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.06■□□□□ 0.48
Ercc2O08811 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.06■□□□□ 0.48
Ercc2O08811 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.06■□□□□ 0.48
Ercc2O08811 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc2O08811 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.05■□□□□ 0.48
Ercc2O08811 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.05■□□□□ 0.48
Ercc2O08811 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Gm10698-201ENSMUST00000182663 604 ntBASIC18.05■□□□□ 0.48
Ercc2O08811 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.05■□□□□ 0.48
Ercc2O08811 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ercc2O08811 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc2O08811 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.05■□□□□ 0.48
Ercc2O08811 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ercc2O08811 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ercc2O08811 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.04■□□□□ 0.48
Ercc2O08811 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.04■□□□□ 0.48
Ercc2O08811 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.04■□□□□ 0.48
Ercc2O08811 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ercc2O08811 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ercc2O08811 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc2O08811 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.03■□□□□ 0.48
Ercc2O08811 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.03■□□□□ 0.48
Ercc2O08811 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ercc2O08811 Gm6576-201ENSMUST00000169678 883 ntBASIC18.03■□□□□ 0.48
Ercc2O08811 Gm37292-201ENSMUST00000192062 758 ntBASIC18.03■□□□□ 0.48
Ercc2O08811 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.03■□□□□ 0.48
Ercc2O08811 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc2O08811 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.02■□□□□ 0.48
Ercc2O08811 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.02■□□□□ 0.48
Ercc2O08811 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.02■□□□□ 0.48
Ercc2O08811 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ercc2O08811 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ercc2O08811 Gm15378-201ENSMUST00000121894 207 ntBASIC18.02■□□□□ 0.48
Ercc2O08811 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ercc2O08811 Gm8520-201ENSMUST00000186517 868 ntBASIC18.02■□□□□ 0.48
Ercc2O08811 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ercc2O08811 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ercc2O08811 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ercc2O08811 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ercc2O08811 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ercc2O08811 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ercc2O08811 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Ercc2O08811 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ercc2O08811 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Ercc2O08811 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ercc2O08811 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ercc2O08811 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.01■□□□□ 0.47
Ercc2O08811 Gm43183-201ENSMUST00000200632 547 ntBASIC18.01■□□□□ 0.47
Ercc2O08811 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ercc2O08811 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc2O08811 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms