Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ebf3O08791 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ebf3O08791 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ebf3O08791 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.3■□□□□ 0.52
Ebf3O08791 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ebf3O08791 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.3■□□□□ 0.52
Ebf3O08791 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.3■□□□□ 0.52
Ebf3O08791 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.3■□□□□ 0.52
Ebf3O08791 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.29■□□□□ 0.52
Ebf3O08791 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ebf3O08791 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.29■□□□□ 0.52
Ebf3O08791 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf3O08791 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.28■□□□□ 0.52
Ebf3O08791 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ebf3O08791 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.28■□□□□ 0.52
Ebf3O08791 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ebf3O08791 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ebf3O08791 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf3O08791 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.28■□□□□ 0.52
Ebf3O08791 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.27■□□□□ 0.52
Ebf3O08791 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf3O08791 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.27■□□□□ 0.52
Ebf3O08791 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ebf3O08791 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ebf3O08791 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.27■□□□□ 0.51
Ebf3O08791 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ebf3O08791 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.27■□□□□ 0.51
Ebf3O08791 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ebf3O08791 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ebf3O08791 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf3O08791 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf3O08791 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf3O08791 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.26■□□□□ 0.51
Ebf3O08791 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.26■□□□□ 0.51
Ebf3O08791 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.26■□□□□ 0.51
Ebf3O08791 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf3O08791 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ebf3O08791 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ebf3O08791 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf3O08791 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.25■□□□□ 0.51
Ebf3O08791 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.25■□□□□ 0.51
Ebf3O08791 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.25■□□□□ 0.51
Ebf3O08791 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.25■□□□□ 0.51
Ebf3O08791 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf3O08791 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.25■□□□□ 0.51
Ebf3O08791 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.25■□□□□ 0.51
Ebf3O08791 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf3O08791 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Ebf3O08791 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ebf3O08791 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ebf3O08791 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.24■□□□□ 0.51
Ebf3O08791 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.24■□□□□ 0.51
Ebf3O08791 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Ebf3O08791 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.24■□□□□ 0.51
Ebf3O08791 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms