Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Polr2jO08740 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Polr2jO08740 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Polr2jO08740 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Polr2jO08740 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.94■□□□□ 0.3
Polr2jO08740 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Polr2jO08740 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Polr2jO08740 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Polr2jO08740 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Polr2jO08740 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Polr2jO08740 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Polr2jO08740 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Polr2jO08740 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Polr2jO08740 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Polr2jO08740 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Polr2jO08740 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.93■□□□□ 0.3
Polr2jO08740 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Polr2jO08740 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Polr2jO08740 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Polr2jO08740 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Polr2jO08740 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.92■□□□□ 0.3
Polr2jO08740 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Polr2jO08740 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Polr2jO08740 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Polr2jO08740 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Polr2jO08740 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Polr2jO08740 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.91■□□□□ 0.3
Polr2jO08740 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.91■□□□□ 0.3
Polr2jO08740 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Polr2jO08740 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.91■□□□□ 0.3
Polr2jO08740 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.91■□□□□ 0.3
Polr2jO08740 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.91■□□□□ 0.3
Polr2jO08740 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Polr2jO08740 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.91■□□□□ 0.3
Polr2jO08740 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.91■□□□□ 0.3
Polr2jO08740 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.91■□□□□ 0.3
Polr2jO08740 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Polr2jO08740 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.91■□□□□ 0.3
Polr2jO08740 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.9■□□□□ 0.3
Polr2jO08740 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Polr2jO08740 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Polr2jO08740 Gm10033-202ENSMUST00000211874 928 ntBASIC16.9■□□□□ 0.3
Polr2jO08740 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.9■□□□□ 0.3
Polr2jO08740 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.9■□□□□ 0.3
Polr2jO08740 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Polr2jO08740 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms