Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1aO08602 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1aO08602 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1aO08602 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1aO08602 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Raet1aO08602 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1aO08602 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1aO08602 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1aO08602 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1aO08602 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1aO08602 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
Raet1aO08602 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.64■□□□□ 0.09
Raet1aO08602 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.64■□□□□ 0.09
Raet1aO08602 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.64■□□□□ 0.09
Raet1aO08602 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.64■□□□□ 0.09
Raet1aO08602 Gm20049-201ENSMUST00000219950 730 ntBASIC15.64■□□□□ 0.09
Raet1aO08602 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1aO08602 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.64■□□□□ 0.09
Raet1aO08602 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1aO08602 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Raet1aO08602 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Raet1aO08602 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Raet1aO08602 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.64■□□□□ 0.09
Raet1aO08602 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1aO08602 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Raet1aO08602 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.63■□□□□ 0.09
Raet1aO08602 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Gm10418-201ENSMUST00000100943 576 ntBASIC15.63■□□□□ 0.09
Raet1aO08602 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.63■□□□□ 0.09
Raet1aO08602 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.63■□□□□ 0.09
Raet1aO08602 Gm27275-201ENSMUST00000184318 272 ntBASIC15.63■□□□□ 0.09
Raet1aO08602 Gm10138-203ENSMUST00000206952 366 ntBASIC15.63■□□□□ 0.09
Raet1aO08602 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.63■□□□□ 0.09
Raet1aO08602 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Raet1aO08602 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.63■□□□□ 0.09
Raet1aO08602 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Raet1aO08602 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raet1aO08602 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Raet1aO08602 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.62■□□□□ 0.09
Raet1aO08602 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.62■□□□□ 0.09
Raet1aO08602 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.62■□□□□ 0.09
Raet1aO08602 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raet1aO08602 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.61■□□□□ 0.09
Raet1aO08602 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.61■□□□□ 0.09
Raet1aO08602 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Raet1aO08602 Mir6349-201ENSMUST00000184059 97 ntBASIC15.61■□□□□ 0.09
Raet1aO08602 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.61■□□□□ 0.09
Raet1aO08602 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Raet1aO08602 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raet1aO08602 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.6■□□□□ 0.09
Raet1aO08602 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.6■□□□□ 0.09
Raet1aO08602 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.6■□□□□ 0.09
Raet1aO08602 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms