Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx1-1G3UXB3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.08■□□□□ 0.81
Nkx1-1G3UXB3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx1-1G3UXB3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx1-1G3UXB3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx1-1G3UXB3 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.08■□□□□ 0.8
Nkx1-1G3UXB3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx1-1G3UXB3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx1-1G3UXB3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Gm14822-201ENSMUST00000122247 291 ntBASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Gm6376-201ENSMUST00000209407 580 ntBASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx1-1G3UXB3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Gm42919-201ENSMUST00000197753 1284 ntBASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 CT025561.1-201ENSMUST00000214972 674 ntBASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 AC125539.1-202ENSMUST00000226449 670 ntBASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-1G3UXB3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx1-1G3UXB3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Gm15794-201ENSMUST00000120182 631 ntBASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Gm17917-201ENSMUST00000218561 953 ntBASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 AC125117.2-201ENSMUST00000228344 1140 ntBASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-1G3UXB3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Gm7862-201ENSMUST00000121461 292 ntBASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Gm26308-201ENSMUST00000157768 69 ntBASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Mir2861-201ENSMUST00000175539 82 ntBASIC20.02■□□□□ 0.8
Nkx1-1G3UXB3 Gm45071-201ENSMUST00000205353 571 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms