Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.17■□□□□ 0.98
NpcdF8VQB8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.17■□□□□ 0.98
NpcdF8VQB8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.17■□□□□ 0.98
NpcdF8VQB8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Gm34391-201ENSMUST00000203706 907 ntBASIC21.16■□□□□ 0.98
NpcdF8VQB8 AW822252-206ENSMUST00000208904 237 ntBASIC21.16■□□□□ 0.98
NpcdF8VQB8 Birc2-201ENSMUST00000054878 378 ntBASIC21.16■□□□□ 0.98
NpcdF8VQB8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
NpcdF8VQB8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.15■□□□□ 0.98
NpcdF8VQB8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
NpcdF8VQB8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NpcdF8VQB8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NpcdF8VQB8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
NpcdF8VQB8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NpcdF8VQB8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.14■□□□□ 0.98
NpcdF8VQB8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NpcdF8VQB8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Gm7213-201ENSMUST00000215977 950 ntBASIC21.14■□□□□ 0.97
NpcdF8VQB8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NpcdF8VQB8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
NpcdF8VQB8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
NpcdF8VQB8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NpcdF8VQB8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NpcdF8VQB8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.11■□□□□ 0.97
NpcdF8VQB8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NpcdF8VQB8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NpcdF8VQB8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NpcdF8VQB8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NpcdF8VQB8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms