Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Gm42778-201ENSMUST00000199644 553 ntBASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh1F7BJK1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Gm6420-201ENSMUST00000193885 723 ntBASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh1F7BJK1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh1F7BJK1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Haglr-201ENSMUST00000100000 2085 ntBASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Nespas-201ENSMUST00000143738 1083 ntBASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms