Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm10477F6SW83 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm10477F6SW83 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.4■□□□□ 0.22
Gm10477F6SW83 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10477F6SW83 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gm10477F6SW83 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Gm7417-201ENSMUST00000192950 473 ntBASIC16.39■□□□□ 0.21
Gm10477F6SW83 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10477F6SW83 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.39■□□□□ 0.21
Gm10477F6SW83 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.38■□□□□ 0.21
Gm10477F6SW83 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10477F6SW83 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.37■□□□□ 0.21
Gm10477F6SW83 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.37■□□□□ 0.21
Gm10477F6SW83 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.37■□□□□ 0.21
Gm10477F6SW83 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10477F6SW83 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10477F6SW83 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms