Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cpsf4lE9Q2N0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4lE9Q2N0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpsf4lE9Q2N0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Gm6576-201ENSMUST00000169678 883 ntBASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Gm43183-201ENSMUST00000200632 547 ntBASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cpsf4lE9Q2N0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpsf4lE9Q2N0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Gm12382-201ENSMUST00000122005 922 ntBASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpsf4lE9Q2N0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf4lE9Q2N0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Gm22240-201ENSMUST00000175225 82 ntBASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Mir8112-201ENSMUST00000184382 131 ntBASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms