Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Gm11025-201ENSMUST00000140773 466 ntBASIC9.98□□□□□ -0.81
Herc1E9PZP8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.98□□□□□ -0.81
Herc1E9PZP8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Herc1E9PZP8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.97□□□□□ -0.81
Herc1E9PZP8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.97□□□□□ -0.81
Herc1E9PZP8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.97□□□□□ -0.81
Herc1E9PZP8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm6089-201ENSMUST00000197666 938 ntBASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Gm37035-201ENSMUST00000194809 2148 ntBASIC9.97□□□□□ -0.81
Herc1E9PZP8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Herc1E9PZP8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.96□□□□□ -0.81
Herc1E9PZP8 Gm25857-201ENSMUST00000082788 129 ntBASIC9.96□□□□□ -0.81
Herc1E9PZP8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC9.96□□□□□ -0.81
Herc1E9PZP8 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.96□□□□□ -0.81
Herc1E9PZP8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc1E9PZP8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.96□□□□□ -0.82
Herc1E9PZP8 AC125350.1-201ENSMUST00000225115 903 ntBASIC9.96□□□□□ -0.82
Herc1E9PZP8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.96□□□□□ -0.82
Herc1E9PZP8 Cmtm5-203ENSMUST00000227441 610 ntBASIC9.96□□□□□ -0.82
Herc1E9PZP8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc1E9PZP8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Gm2423-201ENSMUST00000074863 733 ntBASIC9.95□□□□□ -0.82
Herc1E9PZP8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Gm44544-201ENSMUST00000207052 1844 ntBASIC9.95□□□□□ -0.82
Herc1E9PZP8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Herc1E9PZP8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.95□□□□□ -0.82
Herc1E9PZP8 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.95□□□□□ -0.82
Herc1E9PZP8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc1E9PZP8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.94□□□□□ -0.82
Herc1E9PZP8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms