Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Gm3375-201ENSMUST00000203929 796 ntBASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh17E9PXF0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh17E9PXF0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Gm10231-201ENSMUST00000181584 441 ntBASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Gm10175-202ENSMUST00000208752 441 ntBASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh17E9PXF0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh17E9PXF0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms