Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Gm13401-201ENSMUST00000117074 291 ntBASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Timm23-208ENSMUST00000226683 750 ntBASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc78D3Z5T1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Gm21814-202ENSMUST00000203277 873 ntBASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc78D3Z5T1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc78D3Z5T1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc78D3Z5T1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Gm12085-201ENSMUST00000119263 940 ntBASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Gm29791-202ENSMUST00000207888 369 ntBASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc78D3Z5T1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc78D3Z5T1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Gm3375-201ENSMUST00000203929 796 ntBASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc78D3Z5T1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc78D3Z5T1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms