Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Shank1D3YZU1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shank1D3YZU1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shank1D3YZU1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Shank1D3YZU1 Gm7791-201ENSMUST00000219066 539 ntBASIC15.77■□□□□ 0.11
Shank1D3YZU1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Shank1D3YZU1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shank1D3YZU1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Gm7638-201ENSMUST00000121348 967 ntBASIC15.76■□□□□ 0.11
Shank1D3YZU1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.76■□□□□ 0.11
Shank1D3YZU1 Gm21559-201ENSMUST00000220638 855 ntBASIC15.76■□□□□ 0.11
Shank1D3YZU1 Gm8587-201ENSMUST00000076538 843 ntBASIC15.76■□□□□ 0.11
Shank1D3YZU1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shank1D3YZU1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.75■□□□□ 0.11
Shank1D3YZU1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shank1D3YZU1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.74■□□□□ 0.11
Shank1D3YZU1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Gm13474-201ENSMUST00000122466 815 ntBASIC15.74■□□□□ 0.11
Shank1D3YZU1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.74■□□□□ 0.11
Shank1D3YZU1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Shank1D3YZU1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.73■□□□□ 0.11
Shank1D3YZU1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.73■□□□□ 0.11
Shank1D3YZU1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Shank1D3YZU1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms