Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Syce3B5KM66 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.24■□□□□ 0.83
Syce3B5KM66 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.24■□□□□ 0.83
Syce3B5KM66 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.24■□□□□ 0.83
Syce3B5KM66 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.24■□□□□ 0.83
Syce3B5KM66 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.23■□□□□ 0.83
Syce3B5KM66 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Syce3B5KM66 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.23■□□□□ 0.83
Syce3B5KM66 Gm26833-201ENSMUST00000180899 440 ntBASIC20.23■□□□□ 0.83
Syce3B5KM66 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Syce3B5KM66 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syce3B5KM66 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Syce3B5KM66 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Syce3B5KM66 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Syce3B5KM66 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Syce3B5KM66 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syce3B5KM66 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.21■□□□□ 0.83
Syce3B5KM66 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Syce3B5KM66 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syce3B5KM66 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syce3B5KM66 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syce3B5KM66 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syce3B5KM66 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Syce3B5KM66 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.2■□□□□ 0.82
Syce3B5KM66 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syce3B5KM66 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Syce3B5KM66 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Gm13146-201ENSMUST00000118508 780 ntBASIC20.19■□□□□ 0.82
Syce3B5KM66 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syce3B5KM66 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Syce3B5KM66 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syce3B5KM66 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syce3B5KM66 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syce3B5KM66 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.18■□□□□ 0.82
Syce3B5KM66 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Syce3B5KM66 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.18■□□□□ 0.82
Syce3B5KM66 Gm22325-201ENSMUST00000158904 308 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms