Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn2B2RVW2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn2B2RVW2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Clrn2B2RVW2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn2B2RVW2 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.46■□□□□ 0.87
Clrn2B2RVW2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Clrn2B2RVW2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn2B2RVW2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Golph3-205ENSMUST00000228671 2842 ntBASIC20.45■□□□□ 0.86
Clrn2B2RVW2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn2B2RVW2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Gm27704-201ENSMUST00000185094 107 ntBASIC20.43■□□□□ 0.86
Clrn2B2RVW2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn2B2RVW2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Gm5587-201ENSMUST00000206270 674 ntBASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Gm9731-201ENSMUST00000209480 747 ntBASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Gm7213-201ENSMUST00000215977 950 ntBASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn2B2RVW2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Mir1668-201ENSMUST00000184114 107 ntBASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn2B2RVW2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Gm29518-201ENSMUST00000190858 372 ntBASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn2B2RVW2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Clrn2B2RVW2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn2B2RVW2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn2B2RVW2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn2B2RVW2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn2B2RVW2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Clrn2B2RVW2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn2B2RVW2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms